2020
The time scale of asymptomatic transmission affects estimates of epidemic potential in the COVID-19 outbreak
Modeling shield immunity to reduce COVID-19 epidemic spread
Allelic polymorphism shapes community function in evolving Pseudomonas aeruginosa populations
Quantitative Models of Phage-Antibiotic Combination Therapy
Community-scale Synchronization and Temporal Partitioning of Gene Expression, Metabolism, and Lipid Biosynthesis in Oligotrophic Ocean Surface Waters
Combined pigment and metatranscriptomic analysis reveals synchronized diel patterns of phenotypic light response across domains in the open ocean
Moving Beyond a Peak Mentality: Plateaus, Shoulders, Oscillations and Other'Anomalous' Behavior-Driven Shapes in COVID-19 Outbreaks
Modeling serological testing to inform relaxation of social distancing for COVID-19 control
Reacting to outbreaks at neighboring localities
Linking Light-Dependent Life History Traits with Population Dynamics for Prochlorococcus and Cyanophage
A Primer for Microbiome Time-Series Analysis
Reconciling early-outbreak estimates of the basic reproductive number and its uncertainty: framework and applications to the novel coronavirus (SARS-CoV-2) outbreak
2019
Functional and Comparative Genomic Analysis of Integrated Prophage-Like Sequences in “Candidatus Liberibacter asiaticus”
Optimizing the Timing and Composition of Therapeutic Phage Cocktails: A Control-theoretic Approach
Topological constraints in early multicellularity favor reproductive division of labor
Infect While the Iron is Scarce: Nutrient Explicit Phage-Bacteria Games
When be Temperate: On the Fitness Benefits of Lysis vs. Lysogeny
A practical generation-interval-based approach to inferring the strength of epidemics from their speed
An empirical model of carbon flow through marine viruses and microzooplankton grazers
Contrasting Controls on Microzooplankton Grazing and Viral Infection of Microbial Prey
Spatial Interactions and Oscillatory Tragedies of the Commons
Viral Invasion Fitness Across a Continuum from Lysis to Latency
Information sharing for a coordination game in fluctuating environments
Not by (Good) Microbes Alone: Towards Immunocommensal Therapies
Caution in inferring viral strategies from abundance correlations in marine metagenomes